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Laboratory of Eukaryotic Cell Architecture (LECA)

Head of the laboratory: prof. Hassan Hashimi, Ph.D.

Our group is interested in how one organelle, the mitochondrion, has developed its characteristic architecture during its evolution. Currently, we focus on mitochondrial cristae, which give the organelle its characteristic ruffled appearance.


Dr. Lilia Colina-Tenorio

postdoc

Dr. Ayça Fulya Üstüntanır Dede

postdoc

Bc. Gabriela Šánková

MSc. student

Ömürcan Koçak

Ph.D. candidate

Mgr. Ekaterina Sviridova, Ph.D.

labmanager

 

Research focus


Eukaryotic cells are very complex compared to their prokaryotic cousins. Famously, the former possesses a plethora of sub-cellular compartments named organelles. Organelles embody the link between form and function that underlies life. Our group is interested in how one organelle, the mitochondrion, has developed its characteristic architecture during its evolution. Currently, we focus on mitochondrial cristae, which give the organelle its characteristic ruffled appearance. Cristae are not just simple invaginations of the mitochondria’s inner membrane. They are bioenergetic subcompartments that allow mitochondria to be the powerhouses of the cell. Cristae encapsulate the machinery needed for cellular respiration, the means a cell coverts nutrition into chemical energy the fuel life. Strangely, cristae appear to take on different forms in different organisms, appearing like sheets, paddles or tubes among other shapes. We want to understand how these different shapes arise and if these different shapes affect how mitochondria act as a powerhouse and/or perform other biological processes. Our research allows us to work with very cool protists such as trypanosomes and ciliates, as well as the occasional yeast and alphaproteobacteria. We genetically engineer these cells, observe them with light and electron microscopy, and assay their behaviour through biochemical methods.

 

Bachelor / Master Thesis Offer 2006/2027

Dr. Lilia Colina-Tenorio
Silencing of gene expression in the ciliate Stentor coeruleus by bacteria feeding
• In this self-contained project, we want to test which
proteins are important for shaping mitochondria
• Stentor is one of our cell models because of its weird
mitochondria architecture
• We want to understand how mitochondria shape affects
its status as powerhouse of the cell
Read more
Dr. Ayça Fulya Üstüntanır Dede
Why do the mitochondria of Tetrahymena thermophila look so weird?
• In this self-contained project, we want to test which
proteins are important for shaping mitochondria
• Tetrahymena is one of our cell models because of its
weird mitochondria architecture
• We want to understand how mitochondria shape
affects its status as powerhouse of the cell
Read more
prof. Alexander W. Bruce, prof. Hassan Hashimi, Ph.D.
Investigating mitochondrial structure during preimplantation mouse embryo development and cell lineage formation.
This project aims to investigate the expression of IMMT, a key mitochondrial structural protein, during early mouse embryo development. Using immunofluorescence imaging, IMMT expression and localisation will be examined in the first two embryonic cell lineages to emerge during the preimplantation developmental period: the trophectoderm (TE), which gives rise to the foetal component of the placenta, and the inner cell mass (ICM), which forms the embryo proper.
The TE and ICM are known to adopt distinct metabolic strategies that support their different developmental fates. TE cells rely primarily on mitochondrial oxidative phosphorylation and possess more mature mitochondria characterised by extensive cristae formation, whereas ICM cells depend more heavily on aerobic glycolysis and contain less developed mitochondria. Given IMMT's established role in maintaining mitochondrial cristae structure, this project will test the hypothesis that IMMT expression is enriched in TE cells and contributes to mitochondrial maturation during lineage specification. By correlating IMMT expression patterns with mitochondrial morphology, the study seeks to provide insight into how mitochondrial organisation supports early developmental cell fate decisions.
 

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